rs867770 chr2:102197915 G>A
- Sequence
tttccagattgtggtagaggtagc[G/A]gctctcagggcaagctacttctgc
- ASB in cell types
- Th1-cells
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| Th1-cells | -0.34 | 1.29 | 1.33 |
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Motif analysis
No data available
Genetic associations
GRASP advanced age-related macular degeneration (geographic atrophy), aortic valve calcium, diabetic retinopathy in type 2 diabetes mellitus, hdl cholesterol, infant head circumference, microalbuminuria, years of education
GTEx eQTL Artery_Aorta, Brain_Nucleus_accumbens_basal_ganglia, Breast_Mammary_Tissue, Esophagus_Mucosa, Muscle_Skeletal, Pancreas, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Thyroid, Whole_Blood