rs874116 chr4:101347711 C>T
- Sequence
ggctagagggcgcatcactcagtg[C/T]caggtggcggcctccccgcttgtc
- ASB in cell types
- Ishikawa (endometrial adenocarcinoma) GM12878 (female B-cells)
- ASB for transcription factors
- USF1_HUMAN FOXK2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| USF1_HUMAN | -2.03 | 2.38 | 1.42 | 3.59 | Concordant | |||
| FOXK2_HUMAN | 2.20 | 0.11 | 1.33 | n/a | n/a |
Items per page:
1 – 2 of 2
Motif analysis
