rs874637 chr17:18921239 A>G
- Sequence
tgcccttataatgtggcaggaaat[A/G]tatgtggataaaacacttttccca
- ASB in cell types
- GM12878 (female B-cells)
- ASB for transcription factors
- MTA2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| MTA2_HUMAN | -1.63 | 1.44 | 1.33 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GRASP college completion, diastolic blood pressure (dbp), fasting blood glucose, late onset alzheimers disease, microalbuminuria, neuroblastoma (brain cancer)
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Aorta, Artery_Tibial, Brain_Caudate_basal_ganglia, Brain_Hippocampus, Brain_Putamen_basal_ganglia, Esophagus_Gastroesophageal_Junction, Esophagus_Muscularis, Muscle_Skeletal, Nerve_Tibial, Testis