rs875741 chr5:173860848 G>A
- Sequence
aaactgttcaattattgataagga[G/A]ctcccctgacatcactgaaagaca
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- TAL1_HUMAN NCOR1_HUMAN NFIC_HUMAN HTF4_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TAL1_HUMAN | 1.63 | 0.46 | 1.89 | n/a | No Hit | |||
| NCOR1_HUMAN | 1.84 | n/a | 2.00 | n/a | n/a | |||
| NFIC_HUMAN | 2.62 | n/a | 2.00 | n/a | No Hit | |||
| HTF4_HUMAN | 2.09 | -1.19 | 2.00 | n/a | No Hit | |||
| MTG16_HUMAN | 0.56 | n/a | 2.50 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
EMBL-EBI high light scatter reticulocyte count, high light scatter reticulocyte percentage of red cells, immature fraction of reticulocytes, mean corpuscular hemoglobin, reticulocyte count, reticulocyte fraction of red cells