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rs883342 chr9:129271481 A>G

Sequence
atggcattttcctcttcttctaag[A/G]acaccactcatattggattaggcc
ASB in cell types
GM12878 (female B-cells)
ASB for transcription factors
RAD51_HUMAN COT1_HUMAN MEF2B_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
RAD51_HUMAN 2.06 -1.79 0.011.00 1.33 n/a n/a
COT1_HUMAN 1.63 -1.65 0.031.00 1.33 n/a No Hit
MEF2B_HUMAN 1.80 -1.53 0.041.00 1.33 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP alzheimers disease birth weight salmonella-induced pyroptosis
GTEx eQTL Adipose_Subcutaneous Adipose_Visceral_Omentum Esophagus_Mucosa Lung Nerve_Tibial Skin_Not_Sun_Exposed_Suprapubic Spleen Thyroid

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