rs8868 chr2:231708591 C>T
- Sequence
catccgcctccttgctcgccgcag[C/T]cgcctccgccgcgcgcctcctccg
- ASB in cell types
- A549 (lung carcinoma) GM12878 (female B-cells) thymus-derived CD34- cells CD14+ monocytes
- ASB for transcription factors
- JUN_HUMAN BCL3_HUMAN SMAD5_HUMAN BC11B_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| JUN_HUMAN | 1.65 | -0.69 | 2.14 | n/a | No Hit | |||
| BCL3_HUMAN | 1.58 | -1.03 | 1.62 | n/a | n/a | |||
| SMAD5_HUMAN | 2.29 | n/a | 1.33 | n/a | n/a | |||
| BC11B_HUMAN | 1.96 | n/a | 2.50 | n/a | n/a | |||
| FOXK2_HUMAN | 2.08 | -2.55 | 1.50 | n/a | n/a |
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