rs9097 chr7:151081337 G>T
- Sequence
gcccactcccagtgcgggctgagg[G/T]tcagcagccccgggaggtggcccc
- ASB in cell types
- HEK293 (embryonic kidney) K562 (myelogenous leukemia) HEK293T (embryonic kidney)
- ASB for transcription factors
- PATZ1_HUMAN ZBT26_HUMAN ZN398_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| PATZ1_HUMAN | -2.26 | 2.33 | 2.00 | n/a | No Hit | |||
| ZBT26_HUMAN | n/a | 2.37 | 2.00 | n/a | n/a | |||
| ZN398_HUMAN | -2.02 | 2.08 | 2.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Artery_Tibial, Brain_Cerebellar_Hemisphere, Brain_Cerebellum, Colon_Transverse, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Left_Ventricle, Muscle_Skeletal, Nerve_Tibial, Skin_Sun_Exposed_Lower_leg, Stomach, Testis, Thyroid, Whole_Blood