rs921933 chr19:28290026 C>T
- Sequence
gactaggcagccatggacacccag[C/T]attcttaggactcctgcccaggcc
- ASB in cell types
- HEK293 (embryonic kidney)
- ASB for transcription factors
- CTCF_HUMAN GLIS1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.86 | 1.48 | 2.95 | n/a | No Hit | |||
| GLIS1_HUMAN | 2.59 | n/a | 5.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GRASP advanced age-related macular degeneration, advanced age-related macular degeneration (choroidal neovascularization) vs. no amd, advanced age-related macular degeneration (geographic atrophy), major depressive disorder (narrow definition), major depressive disorder (narrow definition) (males)