rs9260125 chr6:29942680 T>G
- Sequence
tctgcggggagaagcaaggggccc[T/G]cctggcgggggcgcaggaccgggg
- ASB in cell types
- GM12878 (female B-cells)
- ASB for transcription factors
- FOXK2_HUMAN CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXK2_HUMAN | 1.70 | n/a | 1.33 | n/a | n/a | |||
| CTCF_HUMAN | 0.72 | 1.03 | 1.30 | 1.52 | Weak Discordant |
Items per page:
1 – 2 of 2
Motif analysis
