rs9272416 chr6:32637266 C>T
- Sequence
ggctgcatcacaaggggattgccc[C/T]gtctccttccagggctcttaatac
- ASB in cell types
- GM12878 (female B-cells) monocyte-derived macrophages
- ASB for transcription factors
- ZN143_HUMAN TF65_HUMAN CREB1_HUMAN TBP_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZN143_HUMAN | 2.63 | -3.29 | 1.33 | n/a | No Hit | |||
| TF65_HUMAN | 2.45 | n/a | 2.50 | -0.56 | Weak Concordant | |||
| CREB1_HUMAN | 1.96 | -0.32 | 1.50 | n/a | No Hit | |||
| TBP_HUMAN | 1.84 | -2.31 | 1.50 | n/a | No Hit | |||
| BHE40_HUMAN | 1.97 | n/a | 2.50 | n/a | No Hit |
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Motif analysis
