rs9325651 chr1:16896253 G>C
- Sequence
tgttaatcctacagtggagggctg[G/C]cgaataggaagtaacatgtcgcct
- ASB in cell types
- K562 (myelogenous leukemia) GM12878 (female B-cells) liver HepG2 (hepatoblastoma)
- ASB for transcription factors
- SP1_HUMAN CTCF_HUMAN ELF4_HUMAN TYY1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SP1_HUMAN | 2.20 | -0.67 | 1.33 | n/a | No Hit | |||
| CTCF_HUMAN | 1.14 | 0.04 | 1.53 | 0.99 | Weak Discordant | |||
| ELF4_HUMAN | 1.63 | -2.91 | 2.25 | n/a | n/a | |||
| TYY1_HUMAN | 2.12 | 0.80 | 1.47 | n/a | No Hit | |||
| T2FA_HUMAN | 3.17 | n/a | 2.00 | n/a | n/a |
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Motif analysis
