rs9353244 chr6:85015535 T>G
- Sequence
aaggggtggggaatgacctgaaag[T/G]cgctgttgcgtttcctccaggcag
- ASB in cell types
- A549 (lung carcinoma) K562 (myelogenous leukemia) MCF7 (Invasive ductal breast carcinoma) HCT-116-RAD21-mAC
- ASB for transcription factors
- CTCF_HUMAN SMC3_HUMAN RAD21_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.26 | 0.86 | 1.37 | n/a | No Hit | |||
| SMC3_HUMAN | 1.19 | 0.64 | 1.18 | n/a | n/a | |||
| RAD21_HUMAN | 0.83 | 0.77 | 1.26 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GRASP ldl cholesterol change with statins, total cholesterol change with statins, urinary albumin-to-creatinine ratio