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rs9357232 chr6:36960683 G>A

Sequence
acccccacccacttgctcctgcag[G/A]gattgttatcaggacccagcaggg
ASB in cell types
K562 (myelogenous leukemia)
ASB for transcription factors
KDM1A_HUMAN REQU_HUMAN HDAC2_HUMAN FOSL1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
KDM1A_HUMAN 3.01 n/a 3.5·10-51.00 3.00 n/a n/a
REQU_HUMAN 2.67 n/a 3.6·10-41.00 3.00 n/a n/a
HDAC2_HUMAN 2.88 n/a 1.8·10-31.00 3.00 n/a n/a
FOSL1_HUMAN 2.17 -1.48 5.1·10-31.00 3.00 n/a No Hit
EGR1_HUMAN 2.35 n/a 9.3·10-31.00 3.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP asthma college completion years of education
GTEx eQTL Brain_Spinal_cord_cervical_c-1 Heart_Atrial_Appendage Heart_Left_Ventricle Muscle_Skeletal Nerve_Tibial Testis Whole_Blood

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