rs9366225 chr6:170474055 T>C
- Sequence
tctacactgtaaatgtgctgagtg[T/C]ggccgaattctacactataaatgt
- ASB in cell types
- A549 (lung carcinoma) K562 (myelogenous leukemia)
- ASB for transcription factors
- MAFK_HUMAN MAFG_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| MAFK_HUMAN | 1.73 | -1.61 | 1.00 | -2.18 | Concordant | |||
| MAFG_HUMAN | 2.03 | -2.06 | 1.33 | -2.63 | Concordant |
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Motif analysis
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Aorta, Artery_Tibial, Brain_Cerebellum, Brain_Frontal_Cortex_BA9, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Colon_Transverse, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Atrial_Appendage, Heart_Left_Ventricle, Lung, Muscle_Skeletal, Nerve_Tibial, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Whole_Blood