rs9372146 chr6:107083530 G>A
- Sequence
gcgtgcctgcagtcccagatattt[G/A]ggaggctgaggtgggaagatccac
- ASB in cell types
- GM12878 (female B-cells)
- ASB for transcription factors
- IKZF1_HUMAN IKZF2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| IKZF1_HUMAN | -1.26 | 1.98 | 1.33 | -4.85 | Discordant | |||
| IKZF2_HUMAN | -1.41 | 1.78 | 1.33 | n/a | n/a |
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Motif analysis
