ADASTRA v1.6.10
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rs9376088
chr6:99330417
C
>
G
Sequence
tacaacaaaggggatttttaaaaa[C/G]tgtgttcttgatcttcagtaacag
ASB in cell types
K562 (myelogenous leukemia)
foreskin keratinocyte
PC9 (lung adenocarcinoma)
ASB for transcription factors
KDM1A_HUMAN
CTCF_HUMAN
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Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
G
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
KDM1A_HUMAN
1.79
-1.55
0.01
1.00
2.00
n/a
n/a
CTCF_HUMAN
0.50
0.76
1.00
0.02
1.40
n/a
No Hit
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Motif analysis
No data available
Genetic associations
GRASP
hdl cholesterol
,
rheumatoid arthritis
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)