rs939269 chr8:27323939 T>A
- Sequence
cacaggggcagcacacacaaactc[T/A]ccttttcttaaacaggtcttgatt
- ASB in cell types
- A549 (lung carcinoma) HEK293 (embryonic kidney) erythroid progenitors MCF7 (Invasive ductal breast carcinoma)
- ASB for transcription factors
- RAD21_HUMAN SMC3_HUMAN CTCF_HUMAN STAT1_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RAD21_HUMAN | 0.32 | 1.50 | 1.70 | n/a | n/a | |||
| SMC3_HUMAN | -0.01 | 1.18 | 1.73 | n/a | n/a | |||
| CTCF_HUMAN | 0.46 | 1.00 | 1.38 | n/a | No Hit | |||
| STAT1_HUMAN | -2.97 | 1.72 | 2.50 | n/a | No Hit |
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