rs940011 chr17:27532454 A>G
- Sequence
aggccaccctgtgctccagcccgc[A/G]gcacttgagactgacttgccctga
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) K562 (myelogenous leukemia) macrophages HEK293 (embryonic kidney)
- ASB for transcription factors
- ESR1_HUMAN CEBPB_HUMAN NCOA3_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ESR1_HUMAN | -0.42 | 1.58 | 2.00 | n/a | No Hit | |||
| CEBPB_HUMAN | 1.89 | -0.06 | 1.60 | n/a | No Hit | |||
| NCOA3_HUMAN | -0.54 | 1.43 | 1.42 | n/a | n/a |
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