rs944376 chr14:56900988 A>C
- Sequence
cactccctgccaaagttctgcttt[A/C]tttgaaaatgtcctctgagtgaga
- ASB in cell types
- LNCaP (prostate carcinoma)
- ASB for transcription factors
- ANDR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 2.33 | n/a | 1.33 | -2.78 | Concordant |
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Motif analysis
Genetic associations
GRASP bipolar disorder, comorbid depressive syndrome and alcohol dependence, obesity with early age of onset (age >2), waist hip ratio