rs9459849 chr6:167030672 G>T
- Sequence
gtctgtcttatctgtgggacacct[G/T]ccttgacccaagccttttacccct
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- TAL1_HUMAN HTF4_HUMAN MTG8R_HUMAN IKZF1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TAL1_HUMAN | 2.74 | -3.17 | 1.33 | n/a | No Hit | |||
| HTF4_HUMAN | 2.74 | -0.84 | 1.33 | -4.42 | Concordant | |||
| MTG8R_HUMAN | 2.58 | -3.10 | 1.33 | n/a | n/a | |||
| IKZF1_HUMAN | 2.35 | -2.16 | 1.33 | n/a | No Hit | |||
| RING2_HUMAN | 2.37 | -2.28 | 1.33 | n/a | n/a |
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Motif analysis
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Aorta, Artery_Tibial, Brain_Cerebellar_Hemisphere, Brain_Cerebellum, Cells_Cultured_fibroblasts, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Atrial_Appendage, Heart_Left_Ventricle, Lung, Muscle_Skeletal, Nerve_Tibial, Pancreas, Prostate, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Small_Intestine_Terminal_Ileum, Thyroid, Whole_Blood