rs9461914 chr6:33828489 G>C
- Sequence
tttctcccctcactagaacgtaga[G/C]tccttcagaggagtctgttttgcc
- ASB in cell types
- LNCaP (prostate carcinoma) VCaP (prostate carcinoma) LNCaP C4-2B (prostate carcinoma)
- ASB for transcription factors
- CTCF_HUMAN ANDR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.33 | 0.80 | 2.00 | n/a | No Hit | |||
| ANDR_HUMAN | 1.69 | -0.48 | 2.38 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Artery_Tibial, Brain_Cerebellum, Brain_Hypothalamus, Cells_Cultured_fibroblasts, Esophagus_Mucosa, Muscle_Skeletal, Nerve_Tibial, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Thyroid