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rs9465997 chr6:10347934 A>T

Sequence
aatctctctgtgactcattcgatg[A/T]ggaggctgagggaggggatgaatc
ASB in cell types
K562 (myelogenous leukemia)
ASB for transcription factors
MNT_HUMAN HDAC2_HUMAN HDAC1_HUMAN TIF1A_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
MNT_HUMAN 0.72 2.30 0.401.9·10-3 2.58 n/a n/a
HDAC2_HUMAN 0.24 3.06 0.553.0·10-3 2.44 n/a n/a
HDAC1_HUMAN n/a 2.41 1.003.1·10-3 3.00 n/a n/a
TIF1A_HUMAN n/a 2.69 1.007.9·10-3 3.00 n/a n/a
GATA1_HUMAN -1.29 1.22 0.970.01 2.62 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP cystatin c in serum diastolic blood pressure (dbp)

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