rs9470887 chr6:38482656 C>T
- Sequence
aacactgagctatgtctggagata[C/T]aaagataactactcttgttgaaga
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma)
- ASB for transcription factors
- GATA3_HUMAN FOXA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GATA3_HUMAN | -0.56 | 1.01 | 1.53 | n/a | No Hit | |||
| FOXA1_HUMAN | 0.11 | 0.62 | 1.56 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP ldl cholesterol, maternal transmission distortion, mitral annular calcium, tetrology of fallot, total cholesterol