rs948646 chr18:76406212 G>A
- Sequence
ctgacttcttcaccaccaggtggc[G/A]cctgtgctggatttctactctgaa
- ASB in cell types
- epithelial cell of prostate pancreas adrenal gland neural cell
- ASB for transcription factors
- CTCF_HUMAN RAD21_HUMAN SMC3_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.78 | 0.18 | 1.35 | -0.67 | Weak Concordant | |||
| RAD21_HUMAN | 1.63 | 0.20 | 1.35 | n/a | n/a | |||
| SMC3_HUMAN | 1.65 | -1.59 | 1.50 | n/a | n/a |
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Motif analysis
