rs949558 chr10:12707690 T>C
- Sequence
tttattcaacatgatagtttcttg[T/C]ctctaatctctcttggattctttg
- ASB in cell types
- A549 (lung carcinoma) SK-N-SH (neuroblastoma) HAEC (human aortic endothelial cells)
- ASB for transcription factors
- TF65_HUMAN GCR_HUMAN JUN_HUMAN EP300_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TF65_HUMAN | -0.37 | 1.98 | 2.12 | n/a | No Hit | |||
| GCR_HUMAN | -0.97 | 1.36 | 2.17 | n/a | No Hit | |||
| JUN_HUMAN | -0.04 | 1.15 | 1.94 | n/a | No Hit | |||
| EP300_HUMAN | 0.12 | 1.07 | 1.75 | n/a | n/a |
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