rs9508716 chr13:30371989 G>A
- Sequence
acaggaatgctgcagttgggtgac[G/A]catgaggctcaggagcctttgcgc
- ASB in cell types
- GM12878 (female B-cells)
- ASB for transcription factors
- IKZF2_HUMAN IKZF1_HUMAN ATF7_HUMAN SKIL_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| IKZF2_HUMAN | 0.71 | -1.59 | 1.33 | n/a | n/a | |||
| IKZF1_HUMAN | 0.55 | -0.25 | 1.22 | n/a | No Hit | |||
| ATF7_HUMAN | 1.79 | -2.05 | 1.33 | n/a | n/a | |||
| SKIL_HUMAN | 1.41 | -1.69 | 1.33 | n/a | n/a | |||
| RELB_HUMAN | 1.29 | -1.57 | 1.33 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP fasting blood glucose, homa-b, irritible bowel syndrome, microalbuminuria, neuroticism, tardive dyskinesia, triglycerides change with statins, urinary albumin-to-creatinine ratio
GTEx eQTL Brain_Caudate_basal_ganglia, Brain_Cortex, Brain_Frontal_Cortex_BA9, Colon_Transverse, Heart_Left_Ventricle, Nerve_Tibial, Small_Intestine_Terminal_Ileum, Thyroid