rs9519 chr1:43172261 T>C
- Sequence
tggctccacgtgccaccgaatcgc[T/C]ccagcgccagcaactcacagctac
- ASB in cell types
- HEK293 (embryonic kidney) MCF7 (Invasive ductal breast carcinoma) HEK293T (embryonic kidney) monocyte-derived dendritic cells
- ASB for transcription factors
- SPI1_HUMAN MYC_HUMAN ZFX_HUMAN ZN843_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SPI1_HUMAN | 1.21 | -0.53 | 1.96 | n/a | No Hit | |||
| MYC_HUMAN | 0.48 | 1.20 | 2.11 | n/a | No Hit | |||
| ZFX_HUMAN | -0.21 | 1.46 | 1.72 | n/a | No Hit | |||
| ZN843_HUMAN | n/a | 2.07 | 2.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Adrenal_Gland, Artery_Aorta, Artery_Tibial, Brain_Cortex, Brain_Frontal_Cortex_BA9, Brain_Nucleus_accumbens_basal_ganglia, Cells_Cultured_fibroblasts, Colon_Transverse, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Atrial_Appendage, Lung, Prostate, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Testis, Thyroid, Vagina, Whole_Blood