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rs9527 chr10:102863821 C>T

Sequence
tcattatcaggccagctgcagcct[C/T]ttgccttgacctgcattcctagaa
ASB in cell types
CD34+ hematopoietic stem cells-derived proerythroblasts
ASB for transcription factors
TAL1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
TAL1_HUMAN 2.36 -3.62 2.1·10-31.00 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

EMBL-EBI arsenic metabolism
GRASP arsenical skin lesion risk as3mt gene expression in lymphocytes asthma c10orf26 gene expression in lymphocytes c10orf32 gene expression in lymphocytes college completion cystatin c in serum diastolic blood pressure (dbp) fasting blood glucose pcgf6 gene expression in lymphocytes postoperative nausea and vomiting systolic blood pressure (sbp) triglycerides change with statins urinary concentrations of arsenic metabolites (percentage dimethylarsinic acid) urinary concentrations of arsenic metabolites (percentage inorganic arsenic) urinary concentrations of arsenic metabolites (percentage monomethylarsonic acid) usmg5 gene expression in lymphocytes years of education
GTEx eQTL Adipose_Subcutaneous Adipose_Visceral_Omentum Adrenal_Gland Artery_Aorta Artery_Coronary Artery_Tibial Brain_Amygdala Brain_Anterior_cingulate_cortex_BA24 Brain_Caudate_basal_ganglia Brain_Cerebellar_Hemisphere Brain_Cerebellum Brain_Cortex Brain_Frontal_Cortex_BA9 Brain_Hippocampus Brain_Hypothalamus Brain_Nucleus_accumbens_basal_ganglia Brain_Putamen_basal_ganglia Brain_Spinal_cord_cervical_c-1 Brain_Substantia_nigra Breast_Mammary_Tissue Cells_Cultured_fibroblasts Cells_EBV-transformed_lymphocytes Colon_Sigmoid Colon_Transverse Esophagus_Gastroesophageal_Junction Esophagus_Mucosa Esophagus_Muscularis Heart_Atrial_Appendage Heart_Left_Ventricle Kidney_Cortex Liver Lung Minor_Salivary_Gland Muscle_Skeletal Nerve_Tibial Ovary Pancreas Pituitary Prostate Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg Small_Intestine_Terminal_Ileum Spleen Stomach Testis Thyroid Uterus Vagina Whole_Blood

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