rs953364 chr20:20772835 T>A
- Sequence
ttgccccaggggcttcaatttgca[T/A]tgtcactgaggcctccaagaagtt
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma)
- ASB for transcription factors
- ESR1_HUMAN GATA3_HUMAN NFIB_HUMAN REQU_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ESR1_HUMAN | -0.25 | 2.13 | 1.66 | 2.37 | Concordant | |||
| GATA3_HUMAN | -0.77 | 1.53 | 1.33 | n/a | No Hit | |||
| NFIB_HUMAN | -0.84 | 1.19 | 1.33 | n/a | n/a | |||
| REQU_HUMAN | n/a | 1.66 | 1.33 | n/a | n/a |
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Motif analysis
