rs9535292 chr13:49669905 T>C
- Sequence
agcatcacaaccacaggatggcac[T/C]gtagacacatggcattgcctggct
- ASB in cell types
- neural cell pancreas HEK293 (embryonic kidney) gastroesophageal sphincter
- ASB for transcription factors
- CTCF_HUMAN RAD21_HUMAN SMC3_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.38 | 0.54 | 1.43 | 0.19 | Weak Discordant | |||
| RAD21_HUMAN | 0.91 | 0.25 | 1.22 | n/a | n/a | |||
| SMC3_HUMAN | 0.65 | -0.65 | 1.00 | n/a | n/a |
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Motif analysis
