rs953777 chr1:212544289 G>A
- Sequence
cagaacataaccctgtcattaagt[G/A]aagtatgattgtaattgcatcaca
- ASB in cell types
- K562 (myelogenous leukemia) mesenchymal stem cells HEK293 (embryonic kidney)
- ASB for transcription factors
- CEBPB_HUMAN CEBPG_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CEBPB_HUMAN | -1.14 | 1.61 | 1.89 | n/a | No Hit | |||
| CEBPG_HUMAN | n/a | 2.38 | 2.50 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Brain_Caudate_basal_ganglia, Brain_Hippocampus, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Left_Ventricle, Skin_Sun_Exposed_Lower_leg, Testis