rs9540025 chr13:64278711 C>T
- Sequence
ggctaccgtggtctctgaaaatga[C/T]tcattaaataatcaaaaattttgt
- ASB in cell types
- coronary artery smooth muscle LHSAR (prostate epithelial cells) SK-N-SH (neuroblastoma)
- ASB for transcription factors
- JUND_HUMAN JUN_HUMAN ANDR_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| JUND_HUMAN | 2.71 | n/a | 1.33 | -3.51 | Concordant | |||
| JUN_HUMAN | 2.22 | -2.47 | 1.33 | -7.01 | Concordant | |||
| ANDR_HUMAN | 1.62 | 0.14 | 1.50 | n/a | No Hit |
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Motif analysis
