ADASTRA v1.6.10
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rs9579361
chr13:29369263
G
>
A
Sequence
caaagttctgcctcgtttcagccc[G/A]tagagaagcccgttcttctaccct
ASB in cell types
H1 (embryonic stem cells)
fibroblast of pulmonary artery
HCPEpiC (choroid plexus epithelial cells)
ASB for transcription factors
RAD21_HUMAN
CTCF_HUMAN
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Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
A
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
RAD21_HUMAN
1.85
0.07
2.6·10
-5
1.00
1.25
n/a
n/a
CTCF_HUMAN
0.91
0.41
8.7·10
-3
1.00
1.35
n/a
No Hit
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Motif analysis
No data available
Genetic associations
GRASP
cystatin c in serum
GTEx eQTL
Skin_Not_Sun_Exposed_Suprapubic
,
Skin_Sun_Exposed_Lower_leg
,
Testis
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)