rs960117 chr12:46220036 C>T
- Sequence
cccccttatcagatgcatcacaga[C/T]gactcataaactagcaatagctgc
- ASB in cell types
- CD34+ hematopoietic stem cells-derived proerythroblasts GM12878 (female B-cells) CD14+ monocytes
- ASB for transcription factors
- GATA1_HUMAN IKZF1_HUMAN STAT1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GATA1_HUMAN | n/a | 2.29 | 2.00 | n/a | No Hit | |||
| IKZF1_HUMAN | -1.16 | 1.39 | 1.17 | n/a | No Hit | |||
| STAT1_HUMAN | -3.78 | 2.02 | 2.50 | n/a | No Hit |
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