rs9608052 chr22:22942992 A>G
- Sequence
gtcttatcagtcacaacccccagg[A/G]gtcttcatccggaaatcccaggat
- ASB in cell types
- K562 (myelogenous leukemia) foreskin keratinocyte
- ASB for transcription factors
- CTCF_HUMAN KDM1A_HUMAN EGR1_HUMAN SMCA4_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.79 | 0.39 | 1.55 | 2.18 | Discordant | |||
| KDM1A_HUMAN | 4.04 | n/a | 6.00 | n/a | n/a | |||
| EGR1_HUMAN | 0.68 | n/a | 6.00 | n/a | No Hit | |||
| SMCA4_HUMAN | 2.39 | n/a | 6.00 | n/a | n/a |
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Motif analysis
