rs9609157 chr22:30922354 C>T
- Sequence
gtcgcttccgcctcgagcgtgtgg[C/T]gggattgcggaagccctccacagt
- ASB in cell types
- GM12878 (female B-cells)
- ASB for transcription factors
- BHE40_HUMAN ELF1_HUMAN KAISO_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| BHE40_HUMAN | 0.30 | n/a | 1.33 | n/a | No Hit | |||
| ELF1_HUMAN | 0.70 | n/a | 1.33 | n/a | No Hit | |||
| KAISO_HUMAN | n/a | 1.79 | 1.33 | -3.17 | Discordant |
Items per page:
1 – 3 of 3
Motif analysis
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Artery_Tibial, Brain_Caudate_basal_ganglia, Brain_Putamen_basal_ganglia, Esophagus_Mucosa, Nerve_Tibial, Skin_Sun_Exposed_Lower_leg, Spleen, Thyroid, Whole_Blood