rs9647239 chr21:45592539 T>C
- Sequence
ttgagctctgtaaccaggtgctga[T/C]gtcacttctcagaaatcagcctgc
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- E2F1_HUMAN ATF3_HUMAN ATF1_HUMAN ATF2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| E2F1_HUMAN | n/a | 2.75 | 1.33 | n/a | No Hit | |||
| ATF3_HUMAN | -0.29 | 1.22 | 1.39 | 5.59 | Concordant | |||
| ATF1_HUMAN | -2.34 | 2.16 | 1.33 | 9.51 | Concordant | |||
| ATF2_HUMAN | n/a | 0.75 | 6.00 | 7.21 | Concordant | |||
| MNT_HUMAN | -0.67 | 1.08 | 1.33 | n/a | n/a |
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Motif analysis
