ADASTRA v1.6.10
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rs9650705
chr9:34178976
G
>
A
Sequence
accgtcggctcctcccattggtcc[G/A]ggcgtgtggagcgcggcgccatga
ASB in cell types
CD14+ monocytes
periferal blood macrophages
breast tumor tissue
ASB for transcription factors
STAT1_HUMAN
ESR1_HUMAN
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Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
A
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
STAT1_HUMAN
1.45
-0.99
2.9·10
-3
1.00
1.92
n/a
No Hit
ESR1_HUMAN
1.84
n/a
0.02
1.00
2.00
n/a
No Hit
Items per page:
5
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GRASP
adiponectin levels
,
aortic valve calcium
,
body mass index (bmi)
,
college completion
,
comorbid depressive syndrome and alcohol dependence
,
height
,
infant head circumference
,
prop taste detection threshold
,
triglycerides
,
years of education
GTEx eQTL
Adipose_Subcutaneous
,
Artery_Aorta
,
Artery_Coronary
,
Artery_Tibial
,
Brain_Nucleus_accumbens_basal_ganglia
,
Esophagus_Gastroesophageal_Junction
,
Esophagus_Muscularis
,
Muscle_Skeletal
,
Nerve_Tibial
,
Skin_Not_Sun_Exposed_Suprapubic
,
Skin_Sun_Exposed_Lower_leg
,
Testis
,
Whole_Blood
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)