rs9656383 chr7:129694065 G>A
- Sequence
gcttggtgtgctggtgaatgagga[G/A]ctggatctcagttgtcaaactcat
- ASB in cell types
- K562 (myelogenous leukemia)
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| K562 (myelogenous leukemia) | -0.19 | 0.47 | 1.51 |
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Motif analysis
No data available
Genetic associations
GRASP advanced age-related macular degeneration (geographic atrophy), bipolar disorder, college completion, hdl cholesterol, major depressive disorder (narrow definition), major depressive disorder (narrow definition) (females), recurrent early onset major depressive disorder, recurrent early onset major depressive disorder (females)
GTEx eQTL Artery_Tibial, Brain_Cerebellum, Brain_Hippocampus, Brain_Hypothalamus, Brain_Putamen_basal_ganglia, Brain_Spinal_cord_cervical_c-1, Brain_Substantia_nigra, Esophagus_Gastroesophageal_Junction, Heart_Left_Ventricle, Muscle_Skeletal, Nerve_Tibial, Pituitary, Thyroid