rs9660685 chr1:16645298 G>C
- Sequence
ctggaacccagacctctggcagct[G/C]tcactttcacaatgcccttgggct
- ASB in cell types
- K562 (myelogenous leukemia) HepG2 (hepatoblastoma) GM12878 (female B-cells) HEK293 (embryonic kidney)
- ASB for transcription factors
- ARI1B_HUMAN PRD10_HUMAN NR4A1_HUMAN REQU_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ARI1B_HUMAN | 1.57 | n/a | 2.50 | n/a | n/a | |||
| PRD10_HUMAN | 2.74 | -1.39 | 2.00 | n/a | n/a | |||
| NR4A1_HUMAN | 2.61 | -2.89 | 1.33 | n/a | No Hit | |||
| REQU_HUMAN | 1.95 | n/a | 2.50 | n/a | n/a | |||
| NR2C1_HUMAN | 1.91 | -2.18 | 1.33 | n/a | No Hit |
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Motif analysis
