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rs9681955 chr3:127002575 G>C

Sequence
agagcgggagcaggagtgggtcag[G/C]ctgggggaagcaggccacagcccg
ASB for transcription factors
CTCF_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN 1.44 -1.05 0.031.00 2.00 0.53 Weak Discordant
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Motif analysis

CTCF_HUMAN Weak Discordant
CTCF_HUMAN pic

Genetic associations

GRASP advanced age-related macular degeneration tardive dyskinesia
GTEx eQTL Adipose_Visceral_Omentum Artery_Tibial Brain_Spinal_cord_cervical_c-1 Esophagus_Muscularis Nerve_Tibial Skin_Sun_Exposed_Lower_leg Whole_Blood

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