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rs968750 chr16:88784560 G>C

Sequence
accaccgccgcggcccttcccacc[G/C]gggcaaacaccgcctcgcccggcg
ASB in cell types
MCF7 (Invasive ductal breast carcinoma) breast tumor tissue
ASB for transcription factors
ESR1_HUMAN CTCF_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ESR1_HUMAN 1.93 n/a 0.021.00 2.50 n/a No Hit
CTCF_HUMAN 0.46 0.38 0.051.00 1.27 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Brain_Cerebellar_Hemisphere Cells_Cultured_fibroblasts Colon_Transverse Whole_Blood

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