ADASTRA v1.6.10
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rs9695
chr9:94603360
G
>
A
Sequence
aggtccaggtagaggcaattctcc[G/A]gatgcaggcagggcaggtgctcac
ASB in cell types
22RV1 (prostate carcinoma)
MCF7 (Invasive ductal breast carcinoma)
GM12878 (female B-cells)
ASB for transcription factors
CTCF_HUMAN
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Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
A
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN
0.62
0.55
0.29
0.02
1.39
n/a
No Hit
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
bipolar disorder
,
transmission distortion
GTEx eQTL
Adipose_Subcutaneous
,
Cells_Cultured_fibroblasts
,
Colon_Sigmoid
,
Lung
,
Minor_Salivary_Gland
,
Muscle_Skeletal
,
Nerve_Tibial
,
Pancreas
,
Skin_Not_Sun_Exposed_Suprapubic
,
Whole_Blood
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)