rs9729880 chr1:5888804 C>T
- Sequence
ccctctgtcttcaggaagtgcagg[C/T]ctggctgagccttcgggccaaacc
- ASB in cell types
- ZR-75-1 (invasive ductal carcinoma) SK-BR-3 (breast adenocarcinoma)
- ASB for transcription factors
- ESR1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ESR1_HUMAN | -2.17 | 1.93 | 1.50 | 2.57 | Concordant |
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Motif analysis
