rs974357 chr6:32972117 G>T
- Sequence
cgcgcgcggagggggtggggaaaa[G/T]ctcaagcagggtggcgcgcatgag
- ASB in cell types
- fetal bone marrow-derived mononuclear cells breast tumor tissue
- ASB for transcription factors
- KMT2A_HUMAN ESR1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| KMT2A_HUMAN | n/a | 3.02 | 1.50 | n/a | n/a | |||
| ESR1_HUMAN | n/a | 2.66 | 2.50 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP body mass index (bmi), infant head circumference, ldl cholesterol, microalbuminuria, rheumatoid arthritis, total cholesterol, urinary albumin-to-creatinine ratio
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Coronary, Artery_Tibial, Brain_Caudate_basal_ganglia, Breast_Mammary_Tissue, Colon_Sigmoid, Colon_Transverse, Esophagus_Gastroesophageal_Junction, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Atrial_Appendage, Heart_Left_Ventricle, Kidney_Cortex, Lung, Muscle_Skeletal, Nerve_Tibial, Prostate, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Small_Intestine_Terminal_Ileum, Testis, Thyroid, Whole_Blood