rs97762 chr22:48370238 C>T
- Sequence
ggagcctctgcaaactttgctgat[C/T]gtttacattgtacttaaggccatg
- ASB in cell types
- HEK293 (embryonic kidney) MCF7 (Invasive ductal breast carcinoma)
- ASB for transcription factors
- FOXA1_HUMAN GLIS1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | 0.06 | 1.44 | 1.56 | 8.53 | Concordant | |||
| GLIS1_HUMAN | n/a | 0.75 | 2.00 | n/a | n/a |
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Motif analysis
