rs979746 chr17:48258750 A>C
- Sequence
cattctacagtcactgaacataaa[A/C]aaccataaagttacagctgctttt
- ASB in cell types
- LNCaP (prostate carcinoma) VCaP (prostate carcinoma) T47D (invasive ductal carcinoma)
- ASB for transcription factors
- FOXA1_HUMAN ANDR_HUMAN PRGR_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | -0.62 | 2.10 | 1.77 | n/a | No Hit | |||
| ANDR_HUMAN | -0.05 | 0.96 | 1.61 | 2.40 | Concordant | |||
| PRGR_HUMAN | -0.78 | 1.49 | 1.50 | n/a | No Hit |
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Motif analysis
