rs9803732 chr1:99808794 A>C
- Sequence
tttttgtttcggaccagccttaaa[A/C]gggaaacacattaaagtcagtaaa
- ASB in cell types
- K562 (myelogenous leukemia) HEK293 (embryonic kidney) foreskin keratinocyte B-cells
- ASB for transcription factors
- ZN692_HUMAN IKZF1_HUMAN HDAC2_HUMAN ZF69B_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZN692_HUMAN | 3.17 | n/a | 2.00 | n/a | n/a | |||
| IKZF1_HUMAN | -2.42 | 2.08 | 2.00 | n/a | No Hit | |||
| HDAC2_HUMAN | -0.60 | 1.98 | 1.67 | n/a | n/a | |||
| ZF69B_HUMAN | 2.54 | n/a | 2.00 | n/a | n/a | |||
| MGAP_HUMAN | -1.72 | 2.05 | 1.33 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Artery_Tibial, Colon_Sigmoid, Colon_Transverse, Muscle_Skeletal, Nerve_Tibial, Thyroid, Whole_Blood