rs9818020 chr3:173779509 C>T
- Sequence
ccttatttatttaacaaaatttta[C/T]ggagtcctgtaatacatcaaatcc
- ASB in cell types
- LNCaP (prostate carcinoma)
- ASB for transcription factors
- FOXA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | 0.03 | 1.02 | 1.50 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP asthma, diabetic retinopathy in type 2 diabetes mellitus, neuroblastoma (brain cancer), partial epilepsy, paternal transmission distortion, premature ovarian failure, tetrology of fallot, total cholesterol change with statins, transmission distortion