rs9827460 chr3:134030326 T>G
- Sequence
ggcaggaaggctgggatatgaggg[T/G]gcccgaggcgggcgctggaggggc
- ASB in cell types
- HEK293 (embryonic kidney)
- ASB for transcription factors
- ZN398_HUMAN SP2_HUMAN ZFHX2_HUMAN EGR2_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZN398_HUMAN | 3.06 | n/a | 1.33 | n/a | n/a | |||
| SP2_HUMAN | 2.54 | -2.85 | 1.33 | 4.18 | Discordant | |||
| ZFHX2_HUMAN | 1.04 | n/a | 1.50 | n/a | n/a | |||
| EGR2_HUMAN | 1.85 | -1.58 | 1.33 | n/a | No Hit |
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Motif analysis
